Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880988.1_cds_XP_016437620.1_33362
CDS Infomation

[gene=LOC107763647] [db_xref=GeneID:107763647] [protein=probable N-succinyldiaminopimelate aminotransferase DapC] [protein_id=XP_016437620.1] [location=join(21681..21899,25676..26827)] [gbkey=CDS]
Sequence

ATGCAAATCTCTCGGTCAATCCAATGTACCTGGACACCTCAGTATTATTCACATGAGATG
CTGAGGAGCTTTAAACCCTATATTTCCCGCACCTTCTCCAGCAGCATTAGAAGCAGAAAA
TACCCTTTTCCAATGGCGAATTTGTCCACCGTTTCAACACAGAAAGAGGCTGTTTCTACT
CAACATGAGTCAACCCAGATTGTCCCTAAGCCTTTGCAGGTTGCCAAGCGCTTAGAGAAG
TTCAAAACTACAATTTTCACCCAAATGAGTATGCTAGCCATCAAGCATGGAGCTATAAAC
CTTGGCCAGGGCTTTCCCAACTTTGACGGCCCTGATTTTGTAAAAGAAGCAGCTATTCAA
GGCATTAAGGAAGGTAAAAATCAGTATGCTCGAGGATATGGAGTCCCAGACCTCAACTCT
GCTGTGGCTGCTAGATTCAAGAAAGACAGTGGACTTGAGGTTGACCCTGAAAATGAAGTT
ACTGTGACTTCGGGCTGCACCGAAGCAATTGCTGCAACCATTTTGGGCTTGATAAATCCT
GGTGATGAGGTTATCCTGTTTGCTCCTTTTTATGATTCTTATGAGGCTACTTTATCTATG
GCTGGAGCAAAAATAAAGGGTATTACTTTAAGACCGCCAGATTTTTCTCTTCCAATTGAT
GAGCTAAAATCAGCAGTATCAAAGAGTACTCGAGCAATCCTTCTAAACACTCCTCATAAC
CCCACAGGGAAGATGTTCACTCGAGAAGAACTCAATGTCATTGCCTCTCTGTGCATTGAG
AATGATATTCTAGTTTTTGCTGACGAAGTATATGACAAACTAGCCTTTGAAATGGAACAT
ATTTCAATTGCTTCTCTTCCGGGGATGTACGAACGAACTGTGACTATGAATTCTTTGGGA
AAGACATTTTCGCTGACAGGCTGGAAAATAGGTTGGGCGATTGCTCCTCCTCATTTGACA
TGGGGAGTAAGACAGGCTCATTCCTACCTTACCTTTGCAACATCCACCCCGATGCAATAT
GCAGCAGCAACTGCCCTTAGAGCCCCAGATTCTTATTATGAGGAGCTTAAGAGGGATTAC
TCGGCCAAAAAGGCAATATTGGTGGAGGGGTTAAAGGCAGCTGGTTTCACAGTATACCCC
TCGAGTGGAACGTACTTTGTGGTTGTTGATCACACTCCTTTTGGGCTAGAAAATGACATT
GCCTTCTGCGAATACCTGATCAAGGAAATTGGTGTTGTAGCCATTCCAACTAGCGTATTC
TATCTAAATCCAGAAGAAGGGAAGAATCTTGTCAGGTTTACCTTCTGCAAAGATGATGAT
ACTCTTAAAAGTGCAGTGCAGAGGATGAAGGAGAAGCTGTCAAAGAAGTGA

Peptide Sequence

PEP ID

XP_016437620.1
PEP Infomation

PREDICTED: probable N-succinyldiaminopimelate aminotransferase DapC [Nicotiana tabacum]
Sequence

MQISRSIQCTWTPQYYSHEMLRSFKPYISRTFSSSIRSRKYPFPMANLSTVSTQKEAVST
QHESTQIVPKPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQ
GIKEGKNQYARGYGVPDLNSAVAARFKKDSGLEVDPENEVTVTSGCTEAIAATILGLINP
GDEVILFAPFYDSYEATLSMAGAKIKGITLRPPDFSLPIDELKSAVSKSTRAILLNTPHN
PTGKMFTREELNVIASLCIENDILVFADEVYDKLAFEMEHISIASLPGMYERTVTMNSLG
KTFSLTGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQYAAATALRAPDSYYEELKRDY
SAKKAILVEGLKAAGFTVYPSSGTYFVVVDHTPFGLENDIAFCEYLIKEIGVVAIPTSVF
YLNPEEGKNLVRFTFCKDDDTLKSAVQRMKEKLSKK

Transcript Sequence

Gene sequence data has not been registered.